PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8416583.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 104aa    MW: 11278.8 Da    PI: 10.4744
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8416583.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-0975102330
                                HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                        HLH   3 rahnerErrRRdriNsafeeLrellPka 30 
                                ++h+e+ErrRR+riN  +++Lr l+P +
  Rmu_co8416583.1_g000001.1  75 KNHSEAERRRRERINAHLSTLRGLVPRN 102
                                68************************74 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MAFYSFDSNP TIGSDHSSLF NPFTLHGSGG GLTNGSVQLL PHSLVLDSEK GELVKAPARV  60
GKKCVSEAKA LAALKNHSEA ERRRRERINA HLSTLRGLVP RNEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.14e-06bHLH family protein