PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8429197.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 159aa    MW: 18477.5 Da    PI: 10.1596
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8429197.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.93.5e-1871341120
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkr 73 
                                l pG rF P ++el+++yLk+kv+g +++  e+vi e+d+y   + w++ +     +  a    ++k++yfF++++kk+a+++r
  Rmu_co8429197.1_g000001.1   7 LLPGQRFCPMEHELLMFYLKPKVNGMEVPGnEDVICEMDLYGDqDSWKIWErfearR--AndlrRNKDLYFFTQKKKKTARSTR 88 
                                579************************7762467******975489***64344442..1345466799*************** PP

                        NAM  74 knratksgy.WkatgkdkevlskkgelvglkktLvfykgrapkgektd 120
                                ++r++ sg  Wk +   ke++          + L f   r+p++++t+
  Rmu_co8429197.1_g000001.1  89 TSRTVGSGCtWKGQNAAKEIYL-LL-IRISSQHLLFLVSRKPTPTRTK 134
                                ***8888766***********9.44.4444555666667888877775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MDGGCMLLPG QRFCPMEHEL LMFYLKPKVN GMEVPGNEDV ICEMDLYGDQ DSWKIWERFE  60
ARRANDLRRN KDLYFFTQKK KKTARSTRTS RTVGSGCTWK GQNAAKEIYL LLIRISSQHL  120
LFLVSRKPTP TRTKTLCIMF AGSCRSLNLI SHNSYTRNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-08NAC family protein