PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8429551.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 164aa    MW: 18939.3 Da    PI: 5.0716
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8429551.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.94.4e-14541321399
                                TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                +    +pk+f++++g++   s  + ++ + g +We+ l  + + ++++++kGW eF k + L+ g +++F ++g+s+f   v++
  Rmu_co8429551.1_g000001.1  54 N--KGIPKNFLDKYGED--LSNLVYFKLPCGPEWEIGL--TSYNKEVWFRKGWPEFSKFHSLEKGYSLLFGYEGDSRF--QVSI 129
                                3..48*********977..899****************..999999****************************9999..9999 PP

                                E-S CS
                         B3  97 frk 99 
                                f+ 
  Rmu_co8429551.1_g000001.1 130 FDG 132
                                986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MASSYLCRKC ADHRPRSSST TPRRFLKVIS DDTSRDRKLV SISSLSLALY LLKNKGIPKN  60
FLDKYGEDLS NLVYFKLPCG PEWEIGLTSY NKEVWFRKGW PEFSKFHSLE KGYSLLFGYE  120
GDSRFQVSIF DGSNNMEIDY TTRMLESEEG DQDDDISLQI SEDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.16e-17B3 family protein