PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8430763.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ARR-B
Protein Properties Length: 175aa    MW: 19801.5 Da    PI: 5.1417
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8430763.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like80.61.8e-25126175151
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                                kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ
  Rmu_co8430763.1_g000001.1 126 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQ 175
                                79*******************.****************************9 PP
2Myb_DNA-binding35.81.9e-11128175145
                                TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 
                                r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++q
  Rmu_co8430763.1_g000001.1 128 RVVWSVELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQ 175
                                678*******************************************98 PP
3Response_reg35.93.9e-1315653109
                                CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
               Response_reg  53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                                mp+mdG++ll++i  e  +lp+i+++a + ++ + + +  Ga d+l Kp+ +e+l +
  Rmu_co8430763.1_g000001.1   1 MPDMDGFKLLEQIGLEM-DLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKN 56 
                                9************6654.8**********************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MPDMDGFKLL EQIGLEMDLP VIMMSADDGK SVVMKGVTHG ACDYLIKPVR IEALKNIWQH  60
VVRKKKNEWK DVEQSGSVDE GDRQQKPCEE PDYSSSANEG TWKNSKKRKD EDDDAEDRDD  120
TSTLKKPRVV WSVELHQQFV GAVNQLGIDK AVPKKILELM NVPGLTRENV ASHLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-80ARR-B family protein