PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8433021.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 181aa    MW: 20997.6 Da    PI: 9.3967
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8433021.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34.2e-141764148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +g+W+++Ed +l+ +++++G  +W+  ++  g+ R++k+c++rw +yl
  Rmu_co8433021.1_g000001.1 17 KGPWSPDEDHKLIAYIQRYGIWNWSQMPKPAGLARSGKSCRLRWMNYL 64
                               79******************99************************97 PP
2Myb_DNA-binding543.9e-1770115148
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                rg++++eE+e ++++ + +G++ W+ Ia++++ gRt++++k++w+++l
  Rmu_co8433021.1_g000001.1  70 RGNFSKEEEETIIKLQQNMGNR-WSVIAAKLP-GRTDNEIKNYWHTHL 115
                                89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MVRSSTQQCE EKRPLKKGPW SPDEDHKLIA YIQRYGIWNW SQMPKPAGLA RSGKSCRLRW  60
MNYLRPDIKR GNFSKEEEET IIKLQQNMGN RWSVIAAKLP GRTDNEIKNY WHTHLKRHLN  120
NDKAKSGENT SSETETFLLD KEAPKASETS RENFSSSSSG IADEVYHKPQ IPEQQSICET  180
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.19e-56MYB family protein