PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8433201.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 175aa    MW: 19584.2 Da    PI: 10.1736
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8433201.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.31.4e-0879119954
                                HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                 r+RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  Rmu_co8433201.1_g000001.1  79 ARQRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 119
                                69******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
SDQKSTALST TNINFQQPTS SSLSGSSTDQ EPDPEVIAQM KEMIYRAAAF RPVNLGIEMV  60
ERPKRKNVKI SSDPQTVAAR QRRERISERI RVLQKLVPGG SKMDTASMLD EAANYLKFLR  120
SQVKALENLG QKIDSMSNCL PPTSFAFSFN PSFPMQTHHV PLHLNPNHNI HQPPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.15e-55bHLH family protein