PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8437591.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 101aa    MW: 11106.3 Da    PI: 7.5109
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8437591.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA22.51.5e-073172135
                       GATA 21 tLCnaCGlyyrkkgl 35
                               +LCnaCG++++k+++
  Rmu_co8437591.1_g000001.1  3 SLCNACGIRFKKEER 17
                               5***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
LQSLCNACGI RFKKEERRAT AAAATSANGA TSSGSHSWIN NSQTQKMQCY APSMNGNEFR  60
FVDDHDMMTS HEPADAGGGI PFLSWRLNVT DRPSLVHDFT R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.12e-21GATA family protein