PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8441375.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 223aa    MW: 25067.8 Da    PI: 8.8824
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8441375.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.18.1e-153091257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                +R+ +t++q+++L+el+++   r ++ae+++++  +l    +++ ++V++WF N+R +ek+
  Rmu_co8441375.1_g000001.1 30 NTRWIPTTDQIRILNELYYNkgVRSLNAEQIQRICLHLrwygSVESKNVYYWFTNQRVREKQ 91
                               58****************97689*************************************97 PP
2Wus_type_Homeobox85.65.6e-282993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW Pt++Qi+iL+ely+ +G+r+ n+e+iqri  +L+ yG +e+kNV+yWF N++ Re+qk+
  Rmu_co8441375.1_g000001.1 29 SNTRWIPTTDQIRILNELYYnKGVRSLNAEQIQRICLHLRWYGSVESKNVYYWFTNQRVREKQKK 93
                               789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MEPQTQPPTE DGGSNKAAES STNRLCRQSN TRWIPTTDQI RILNELYYNK GVRSLNAEQI  60
QRICLHLRWY GSVESKNVYY WFTNQRVREK QKKKITSDVH VPMQRSRLVS NSNGTNWKPE  120
DQYINFGSSV SASASSAGVI SFNGKMGNYG GYGSMNTEIE TLPLFPMHGK DNFGNMKTIS  180
EGGGGYNYYS DGWGGYNSGS HISLELSLDS YDSTYFPAKV FSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-26WOX family protein