PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8454661.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 261aa MW: 30174.8 Da PI: 6.5091

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8454661.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.7	3e-26	85	175	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY +Y++++GF+vr++++++s++n+ ++ ++fvCskeg+r+++ +++ + ++tr gC a+l+v +++ +kw+vtk+++ Rmu_co8454661.1_g000001.1 85 EFYIAYGRHTGFTVRIHHNRRSRMNNMVIGQDFVCSKEGFRDKKYVYrDNRVLPPPPVTREGCAAMLRVALRDGEKWVVTKFVK 168 6****************************************99882333344899*********************** PP FAR1 84 eHnHela 90 eHnH+l+ Rmu_co8454661.1_g000001.1 169 EHNHTLM 175 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
SCDGCRACVN LVLEVIMESE SNNNNNNNPF DSDESQSCEL PNDIDLCSGE VDKIIELSNG 60 RSHLMGNPIE PYIGMEFKSR DTAREFYIAY GRHTGFTVRI HHNRRSRMNN MVIGQDFVCS 120 KEGFRDKKYV YRDNRVLPPP PVTREGCAAM LRVALRDGEK WVVTKFVKEH NHTLMSPSKV 180 PWRGSGKTLI NEDEKDRKIR ELTIELSNER QRCKRKCAAY QDQLNRLLKD VQDHSDHLSE 240 RVQDIVKNIR ELESEQSEDS D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	215	RQRCKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	6e-42	FAR1 family protein