PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8455867.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

SBP

Protein Properties

Length: 251aa MW: 27522.2 Da PI: 9.2306

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8455867.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	46.9	7.2e-15	1	30	49	78
EEETTT--SS--S-STTTT-------S--- CS SBP 49 fhelsefDeekrsCrrrLakhnerrrkkqa 78 fh+l efD++krsCrrrLa+hnerrrk+q+ Rmu_co8455867.1_g000001.1 1 FHQLPEFDQGKRSCRRRLAGHNERRRKPQP 30 9**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
FHQLPEFDQG KRSCRRRLAG HNERRRKPQP GSMMSTRFGR LSSSIYENTS RVGSFLMDFT 60 AYPRAGRDEW ATARTCERPP GNQTVTATGK FLQHPWQSNP ENTRSDLYLQ GSAGGTSYPG 120 PGIPPGECVS GVTDSSCALS LLSNQPWDSR NRGVGTNAFI NTQGAPVAQS IANVGTINPF 180 PTTSWGFKGN EAGSSSHQML PDLGLGQISQ PHNSHYSSEL ELSQQGRRQQ NMELGNSRGY 240 DSSSQHMNWS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	1e-39	SBP family protein