PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8459497.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 415aa MW: 46431.7 Da PI: 4.552

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8459497.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61	3.8e-19	30	104	55	127
NAM 55 ekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 + +wyfF++rd ky++ ++r+nr+t +g Wk tg+ +++++ +++++g k++L+f k pk++k++Wv+hey Rmu_co8459497.1_g000001.1 30 QGKWYFFAPRDYKYPNsSTRSNRTTGEGSWKPTGNVQDIKAPgSEAVIGRKRILTFQKRGVPKSHKSSWVIHEYY 104 459**********8578******************9666779***********************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
LAFTGQENLG RKLFFFFFFW FTRAESWDSQ GKWYFFAPRD YKYPNSSTRS NRTTGEGSWK 60 PTGNVQDIKA PGSEAVIGRK RILTFQKRGV PKSHKSSWVI HEYYHIQPHS DPPKQIGDFV 120 VCCLKYKSDN SDHDEDAPFC NRGSGSCSMV SDVANQLVEE NLASNEQFNG TDDEAETGGG 180 TITEAEEYLA YKKLRDELGI PIGNQNEFQG SQTDPCNLWT SVEGQADRSN SSHHMNEEQL 240 DDPENMDSFF RTPAPPQLHQ LHQSPMNTTN VHNDECCKRK YPFEDNDSSL NKKNNISSND 300 GDELVSNTTS NSENQAADVI LEGDSVICRL KNKSDKKGSL VSDEGEPDST GVSNWKIQAA 360 QALKNDEPLF HQPQPLDYCC SSAVWTSLEL EAVLQAIGTD DDCNKLQSPC GDNTS

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

LAFTGQENLG RKLFFFFFFW FTRAESWDSQ GKWYFFAPRD YKYPNSSTRS NRTTGEGSWK  60
PTGNVQDIKA PGSEAVIGRK RILTFQKRGV PKSHKSSWVI HEYYHIQPHS DPPKQIGDFV  120
VCCLKYKSDN SDHDEDAPFC NRGSGSCSMV SDVANQLVEE NLASNEQFNG TDDEAETGGG  180
TITEAEEYLA YKKLRDELGI PIGNQNEFQG SQTDPCNLWT SVEGQADRSN SSHHMNEEQL  240
DDPENMDSFF RTPAPPQLHQ LHQSPMNTTN VHNDECCKRK YPFEDNDSSL NKKNNISSND  300
GDELVSNTTS NSENQAADVI LEGDSVICRL KNKSDKKGSL VSDEGEPDST GVSNWKIQAA  360
QALKNDEPLF HQPQPLDYCC SSAVWTSLEL EAVLQAIGTD DDCNKLQSPC GDNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66300.1	2e-18	NAC family protein