PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8469521.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 278aa    MW: 31518.4 Da    PI: 5.2706
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8469521.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM138.93.2e-43111441128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk 79 
                                +p G+rFhPt+eelv++yLkkk++g +  e++++i+e+d++k+eP +Lp+    +++a++ ew+fF++++ ky++++r++r+t+
  Rmu_co8469521.1_g000001.1  11 VPIGYRFHPTEEELVNHYLKKKIHGGNdSEINQIIPEIDLCKYEPAELPAllgtETEAHDMEWFFFTRKAYKYNKSSRSKRSTN 94 
                                589********************99985677778***************656666666788*********************** PP

                        NAM  80 sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +gyWk tg ++ ++++ +++++  k+tL+fy+gr p+++kt+Wv+hey l
  Rmu_co8469521.1_g000001.1  95 KGYWKITGPERGIKARrSKAVIAKKRTLTFYQGRVPTSKKTSWVIHEYYL 144
                                **************994555688899**********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MSRENTKPLS VPIGYRFHPT EEELVNHYLK KKIHGGNDSE INQIIPEIDL CKYEPAELPA  60
LLGTETEAHD MEWFFFTRKA YKYNKSSRSK RSTNKGYWKI TGPERGIKAR RSKAVIAKKR  120
TLTFYQGRVP TSKKTSWVIH EYYLPGNGII PYPKQAQGDY VICRLKISDK KDSSVINEEE  180
PGTASLSEMN QEGNEELLLH QPQPLDDCCS SALRSPVSQE LEAVLQTNGT NDDCNELQSP  240
FGDGDSCVED GNEVSTCDEC ETVYDVFPQV RMNMLCCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-37NAC family protein