PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8480485.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 178aa MW: 19809.3 Da PI: 10.0609

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8480485.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.1	9.3e-29	127	176	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ Rmu_co8480485.1_g000001.1 127 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQ 176 9************************************************* PP
2	Myb_DNA-binding	44.9	2.8e-14	128	176	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q Rmu_co8480485.1_g000001.1 128 RMRWTTTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQ 176 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MRTTSSPLPD LSLQISPPSD HYEMGLARKA LNGDRSSTTD STSSGSDLSH ENVLYHLDQR 60 TNYNLTSAEP EPNLSLGLEM KDIISSSTSS TPLLPRNFNH HHPQIYGRDF KRSARTVGNV 120 KRSVRAPRMR WTTTLHAHFV HAVQLLGGHE RATPKSVLEL MNVKDLTLAH VKSHLQVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	3e-46	G2-like family protein