PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8485709.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 184aa    MW: 20332.9 Da    PI: 6.5056
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8485709.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.81.2e-1569163698
                                ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                         B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkld 85 
                                +++ ++++++  ++ +fa+eh  k+  s  ++l++++ r+W+ ++ ++ +s++     + + GWk F ++n+L  gD++vF+l+
  Rmu_co8485709.1_g000001.1  69 MTAAYMRLSLAHISASFAAEHLCKPGISCNVILQNSEERVWTAQCFVSEHSDHrvqaSLSGPGWKAFKQDNHLVLGDVCVFELI 152
                                566677777889*********777889999***************88666655555577779********************99 PP

                                SSSEE..EEEEE- CS
                         B3  86 grsefelvvkvfr 98 
                                +  e++l+v++f+
  Rmu_co8485709.1_g000001.1 153 D--ERKLKVSIFQ 163
                                7..5667999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MEIDYPIHGG GIDVTPKGKK PGANQDVPPA HLEARANSVS SGSSADEDQN NLLTTTSFKS  60
DKPIFMLNMT AAYMRLSLAH ISASFAAEHL CKPGISCNVI LQNSEERVWT AQCFVSEHSD  120
HRVQASLSGP GWKAFKQDNH LVLGDVCVFE LIDERKLKVS IFQGKVKIIR QNEENEARHI  180
SQFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-10B3 family protein