PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8487513.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 233aa    MW: 26103.8 Da    PI: 5.3942
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8487513.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-1887137255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +++GVr+++ +g+++AeIrdp++ng   r++lg++ tae+A  a+++a+ k++g
  Rmu_co8487513.1_g000001.1  87 HFRGVRRRP-WGKYAAEIRDPKKNG--MRVWLGTYETAEDAGLAYDRAAFKMRG 137
                                69*******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MSIETQSFSN SDWRALLESI RQHLLDDDFD TQLGFFADSP AQRTSSSNST EISNSDAEIV  60
GRNQAFTSEF EEEVAERKHH APSAPRHFRG VRRRPWGKYA AEIRDPKKNG MRVWLGTYET  120
AEDAGLAYDR AAFKMRGSKA KLNFPHLIGT HDMEVGRVFP KRASPEPASP SSTTSSEDGS  180
PKPKRRRGGV DSDEAAQEFH LFQVDSFTFG NELLVEDMVL LSPSECSDIL SFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-40ERF family protein