PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8490377.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

ARF

Protein Properties

Length: 161aa MW: 18164.1 Da PI: 11.5017

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8490377.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34	5.4e-11	2	43	56	99
TTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 56 sgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ Rmu_co8490377.1_g000001.1 2 PKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLLLGIRRA 43 579***********************..8899999**997 PP
2	Auxin_resp	121.7	5.5e-40	68	151	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha st+s F+v+YnPras+seFv++++k+ ka+ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k Rmu_co8490377.1_g000001.1 68 AAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 151 79*****************************986599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLLLGI RRATRPQTVM PSSVLSSDSM 60 HIGLLAAAAH ASSTNSCFTV FYNPRASPSE FVIPLSKYIK AVFHTRVSVG MRFRMLFETE 120 ESSVRRYMGT ITGISDLDPV RWPNSHWRSV KVIKRSTIVL Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	4e-91	ARF family protein