PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8493309.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 248aa    MW: 27578.5 Da    PI: 5.9639
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8493309.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.71.4e-29179153128
                        NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                ++e+ew+fFs+r +ky++g +++rat+sgyWkatgk+++v+s +++++g k+tLvf+ grapkge+t+W+mhey +
  Rmu_co8493309.1_g000001.1  17 QSENEWFFFSPRGRKYPNGAQSRRATESGYWKATGKERNVKS-SSNVIGSKRTLVFHIGRAPKGERTEWIMHEYCM 91 
                                4689**************************************.999****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVGLIDTGVF VAKSVIQSEN EWFFFSPRGR KYPNGAQSRR ATESGYWKAT GKERNVKSSS  60
NVIGSKRTLV FHIGRAPKGE RTEWIMHEYC MLNDKSQDSM VVCRLKKNSE FRLNDTTNRG  120
SSSQSPLSTV QNSENAIFEV GIDQGEKATE CHSKKSTSSY DSHSIEQIDS ASDSYPKLTP  180
EVTQMESSQH QKCSYDDDFF AEILKDDIIN LDESSVSVAA VTPPVVANNS EAQQHSMQAV  240
ASQAIPFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.14e-59NAC family protein