PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8500471.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 283aa MW: 31048.2 Da PI: 5.0086

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8500471.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.7	3.9e-11	253	277	1	25
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 +pr+rWtpeLHerFveav++L G+e Rmu_co8500471.1_g000001.1 253 RPRMRWTPELHERFVEAVKKLDGAE 277 59*******************9986 PP
2	Myb_DNA-binding	25.6	2.8e-08	255	274	1	20
TSSS-HHHHHHHHHHHHHTT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlG 20 r+rWT+e++e++v+avk+l Rmu_co8500471.1_g000001.1 255 RMRWTPELHERFVEAVKKLD 274 89****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MKVGLSHVIM SHHGVSSVSQ SQTTKGITES YCTSLSPVHD FLGCESEGRS SVARECSSAR 60 LSPFIRTESF SPPTNVRESS LQHSKSTFSR SSVFCTSLYQ SSSSSSERQL GNLPFLPHPP 120 IYSQSISAVD SKYPMLLSED VSNQYDDEQS DYLMKDFLNL TGDASDDSFH GIGRGGDTIA 180 LTDQLEFQFL SDQLDIAITD NGENPRLDEI YEIPQASSKP AIELTCSKSC GSTAPPVDAL 240 SSHPSPGPSS AHRPRMRWTP ELHERFVEAV KKLDGAESKY YNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	5e-55	G2-like family protein