PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8502503.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 162aa MW: 18745.3 Da PI: 9.7376

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8502503.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	127.8	8.7e-40	19	146	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyat.gkrknratksg 81 lp+G+rFhPt+eelv+++Lk+k++g +++ ++evdi+k+ePwdLp+ ++++++ew++Fs+ d k+ + + ++nrat+ g Rmu_co8502503.1_g000002.1 19 LPVGYRFHPTEEELVDHFLKNKMQGYAFDE---VPEVDICKHEPWDLPAfsPLRSDDEEWFYFSRPDYKSGKkQGQANRATEGG 99 799*********************9777...9**********4456778999*****9998626699*** PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +Wk t k+ ++ ++ +++++g k++L+fy+g+ ++g+kt+W +hey Rmu_co8502503.1_g000002.1 100 FWKITAKEGTIRARrSKAVIGKKRILTFYTGKVRSGQKTSWGIHEYY 146 ********98566679************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MAASSSRLRV GCRFDPRELP VGYRFHPTEE ELVDHFLKNK MQGYAFDEVP EVDICKHEPW 60 DLPAFSPLRS DDEEWFYFSR PDYKSGKKQG QANRATEGGF WKITAKEGTI RARRSKAVIG 120 KKRILTFYTG KVRSGQKTSW GIHEYYIPET QLPNAARQVI TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	2e-38	NAC family protein