PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8513525.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family LSD
Protein Properties Length: 57aa    MW: 6225.09 Da    PI: 8.3401
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8513525.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD143.94e-14630125
                    zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                               Cg+C tlL+YP+GA sVRC++C +V
  Rmu_co8513525.1_g000001.1  6 CGSCTTLLMYPYGALSVRCSSCSFV 30
                               **********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    
VGQVKCGSCT TLLMYPYGAL SVRCSSCSFV TEVRDHNMRP PWSVQQGQPT PPSNSVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21610.14e-19LSD family protein