PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8520667.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 234aa    MW: 26147.9 Da    PI: 4.2981
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8520667.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-1999148355
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GVr+++ +g+++AeIrd + ng   r++lg+f+tae+Aa a+++a+ +++g
  Rmu_co8520667.1_g000001.1  99 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEDAALAYDQAAFAMRG 148
                                9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDSSEFSFES CSSFSSLGSD LSWDLFNFDH SYNQVQVPAQ LPFNENDSEE MVLYGVLAQA  60
GAGDSSDATS TAHLSKDHEE VNSNAAVEYE EPMKDEIAYR GVRRRPWGKY AAEIRDSTRN  120
GVRVWLGTFD TAEDAALAYD QAAFAMRGTL AVLNFPADVV YQSLVDMNYG FEEGSSPVLA  180
LKKRHSMKRK SSMNKKKKNV QKCDDDVEEL RLENVVVFED LGADYLEELL SISS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182198KKRHSMKRKSSMNKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-50ERF family protein