PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000014.1_g000033.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 171aa MW: 19861.4 Da PI: 8.4691

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000014.1_g000033.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.6	4.4e-31	13	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyatgk.rknratk. 79 lp+GfrF Ptdeelv++yL +k+ +++++++++i+e++ y+ +P++L +++ +e++w+fF+++d+ + +++ +++r ++ Rmu_sc0000014.1_g000033.1 13 LPVGFRFMPTDEELVSHYLMNKACSRSVPVADAIQEINatrFYSNHPKSLV-TFSDGERDWFFFIHEDNDSCSSHaQRKRNVRe 95 79***********************999888887753338999*6.7788999**9998876433133333222 PP NAM 80 ....sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 g+Wk g+++++++++g++ +k L++++g +++k+++t+W m ey+l Rmu_sc0000014.1_g000033.1 96 vgngLGFWKPNGSENPIYNEDGNVFATKIYLTYFSGscHSNKPKRTHWKMVEYHL 150 3344789***********************8755889999********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MESQKVVVSS NLLPVGFRFM PTDEELVSHY LMNKACSRSV PVADAIQEIN ATRFYSNHPK 60 SLVTFSDGER DWFFFIHEDN DSCSSHAQRK RNVREVGNGL GFWKPNGSEN PIYNEDGNVF 120 ATKIYLTYFS GSCHSNKPKR THWKMVEYHL QIRREWVVLG RLQRGMDYTG F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14000.1	1e-17	NAC family protein