PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000026.1_g000016.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 178aa    MW: 20225.1 Da    PI: 4.1245
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000026.1_g000016.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.81.9e-14128652128
                        NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                ++ee+ +yfF++r+k +++ k+  r++ sg+W+a+ +++ v + ++++vg+k+ + +  g++p+ ++  W+m+ey++
  Rmu_sc0000026.1_g000016.1  12 EEEEQPLYFFTHRKKLNPKAKKFDRKVGSGTWSAQYSKNVVAA-DDSVVGIKREFRYEGGSDPH-QNGAWLMQEYQI 86 
                                3345577***************************998666666.999**********9999998.89********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MFHAQSISIM KEEEEQPLYF FTHRKKLNPK AKKFDRKVGS GTWSAQYSKN VVAADDSVVG  60
IKREFRYEGG SDPHQNGAWL MQEYQITSHS NDLVQKEGSN DDLVASADQP LFTTNDKLQT  120
VQVDETNISI ADCPNDTSYS YFDLEVEEFF GLTTDDIYDD DDCQFSSSEI QAFLACLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.31e-10NAC family protein