PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000051.1_g000016.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 187aa    MW: 19897.2 Da    PI: 10.3179
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000051.1_g000016.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like83.91.7e-2615611056
                    G2-like 10 LHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
                               +H+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Rmu_sc0000051.1_g000016.1 15 IHRRFLHALQQLGGSHTATPKQIRELMKVDGLTNDEVKSHLQKYRLH 61
                               6********************************************97 PP
2Myb_DNA-binding29.41.9e-091659948
                               HHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  9 dellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                               + ++++a +qlGg    t+k I + m   g+t  ++ks++qky+
  Rmu_sc0000051.1_g000016.1 16 HRRFLHALQQLGGShtaTPKQIRELMKvDGLTNDEVKSHLQKYR 59
                               88**********99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MAAASGIQQC IYLLIHRRFL HALQQLGGSH TATPKQIREL MKVDGLTNDE VKSHLQKYRL  60
HTRRPTPTIH NNNNNNSNAQ APQFVVVGGI WVPPQDYNAA VAAANTAPGE AARVVAAANG  120
IYAPVASTPS TVTQVSPSAM HRPRPKKPEP SSHSEERASH SGEGRGHSNS TATSPSSTHT  180
PASPPVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.11e-35G2-like family protein