PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000064.1_g000029.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 246aa    MW: 28502.3 Da    PI: 7.6594
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000064.1_g000029.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.61.9e-26159152128
                        NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +++e+ewyfF++r++ky++g+r+nr++++g+Wk tgkd+ ++s++ge +g k+tL +++g++++ +kt+W mheyrl
  Rmu_sc0000064.1_g000029.1  15 RHGEREWYFFTPRERKYPHGSRPNRTAHDGFWKVTGKDEVITSATGEIIGYKNTLDYFEGTHSENQKTKWKMHEYRL 91 
                                34788**********************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MIFLPFQNVE TQLNRHGERE WYFFTPRERK YPHGSRPNRT AHDGFWKVTG KDEVITSATG  60
EIIGYKNTLD YFEGTHSENQ KTKWKMHEYR LKKSERDEDI AASNNEKCQR DMKLDDCVLC  120
KIYTSNRCKA GKSTKKISNS AKKPFNSVQD RDDQHENQDQ PTFGGDYNSN SPAAFNNGYG  180
STNKFCDPAN LPLQDQAYGI AHPSGHINNF NNQNNTHYNM HSSSLEDHVR DFERWLITAV  240
HEEGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-30NAC family protein