PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000064.1_g000031.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 189aa    MW: 21722.1 Da    PI: 5.6985
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000064.1_g000031.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.38.6e-2167954128
                        NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +e+ewy+F++  +ky +++r+nr++ +g+Wk   + ++++++++e+vg +++L fy+g+ p+g+kt W m+ey++
  Rmu_sc0000064.1_g000031.1   6 RESEWYYFTPITRKYVNSSRPNRVAPNGFWKPRMS-NPIKDRNNEVVGYRTSLEFYEGKYPNGNKTGWKMNEYTM 79 
                                468****************************8865.9************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MYDLLRESEW YYFTPITRKY VNSSRPNRVA PNGFWKPRMS NPIKDRNNEV VGYRTSLEFY  60
EGKYPNGNKT GWKMNEYTMN EAIIPPNINT NGKTRIKVAR KLQNEIQYQL ENPIGRNKST  120
STSIVCPSNT TTTTGDQLPL HDAMEHEVQQ DGSSDSKHEE DDDGWLIIGV ESLNISSDPM  180
IEGDFGRHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.24e-20NAC family protein