PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000071.1_g000023.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family LBD
Protein Properties Length: 227aa    MW: 24694.1 Da    PI: 6.9833
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000071.1_g000023.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260134.34.8e-42571561100
                     DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklq 84 
                                +CaaCk+lrr+C++ Cvlapyfp ++p kf ++h++FGasn++k+l++lp+++r da+ss+vyeA+ar+rdPvyG++g i +lq
  Rmu_sc0000071.1_g000023.1  57 PCAACKILRRRCVERCVLAPYFPPSDPIKFTIAHRVFGASNIIKFLQDLPDSQRADAVSSMVYEANARLRDPVYGCAGAICSLQ 140
                                7*********************************************************************************** PP

                     DUF260  85 qqleqlkaelallkee 100
                                +q+ +l+++la++++e
  Rmu_sc0000071.1_g000023.1 141 KQVTELQSQLAKAQAE 156
                                ************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MEFNANTTAT TKTPPSSFTY SPLTSPSSSP MISSSPATSP TTSARPPLPP PPVVVSPCAA  60
CKILRRRCVE RCVLAPYFPP SDPIKFTIAH RVFGASNIIK FLQDLPDSQR ADAVSSMVYE  120
ANARLRDPVY GCAGAICSLQ KQVTELQSQL AKAQAELINM QSQQGNLVAL ICMNMSTTTA  180
TNTQQSKEAA VVPILQQQQY SNFNIDTSCF LDENNLGSAW DWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-70LBD family protein