PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000078.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 315aa MW: 36107.1 Da PI: 7.0502

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000078.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.7	2.4e-19	78	138	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql++L el+ ++p+a+++++ +++l +++ ++V++WFqN+Ra+e++ Rmu_sc0000078.1_g000007.1 78 SSRWNPTPEQLRVLDELYGHgLKTPTAQQIRQVTARLrhfgKIEGKNVFYWFQNHRARERQ 138 58**************988************************************97 PP
2	Wus_type_Homeobox	109.2	2.3e-35	77	140	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+PtpeQ+++L+ely +Gl+tP++++i+++ta+L+++Gkie+kNVfyWFQN++aRerqk+ Rmu_sc0000078.1_g000007.1 77 PSSRWNPTPEQLRVLDELYGHGLKTPTAQQIRQVTARLRHFGKIEGKNVFYWFQNHRARERQKR 140 689***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MHEDDYYSIK AANLHEPAAE VVFTPKLTAT SNMTQSHVLS FNHQQHDQEV GVKSLQGRSG 60 GDDCYNGHEP SSAASQPSSR WNPTPEQLRV LDELYGHGLK TPTAQQIRQV TARLRHFGKI 120 EGKNVFYWFQ NHRARERQKR RREPMSMRQY HSKEQQLWSN KESAGAAGLR RSGTLEIEHQ 180 NKWTLSNCGV LADQELSPGL RKRMSMVKGN YSGQLEEQSY SATQTLEARA ATLIYPKLLD 240 YHHPHYDYDY DYDYGTVLSA PNIYKGAESR LEAQTLELFP LESDNVKGVN ESPMIRTTNI 300 DSNKDFMADL YFQFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	6e-25	WOX family protein