PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000082.1_g000051.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 161aa    MW: 18274.6 Da    PI: 10.255
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000082.1_g000051.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.42.1e-173091257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                                +R+t+t++q+++L+elF++   r p+ e+ +++  +l    ++++++V++WFqN++a++k+
  Rmu_sc0000082.1_g000051.1 30 NTRWTPTPDQIRILNELFYSkgIRSPTVEQVQRICFQLrryrQIETKNVFYWFQNQKARDKR 91
                               58*****************7679*************************************97 PP
2Wus_type_Homeobox95.64.3e-312993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRWtPtp+Qi+iL+el++ +G+r+P+ e++qri  +L++y +ie kNVfyWFQN+kaR+++k+
  Rmu_sc0000082.1_g000051.1 29 SNTRWTPTPDQIRILNELFYsKGIRSPTVEQVQRICFQLRRYRQIETKNVFYWFQNQKARDKRKK 93
                               689***************9879*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MEPQTHQPTE DGGSNKAAES SASMLCRRSN TRWTPTPDQI RILNELFYSK GIRSPTVEQV  60
QRICFQLRRY RQIETKNVFY WFQNQKARDK RKKKITSDVH VPMQRSGLVG GSINLNFGST  120
SSTVMKQRGE DHQAIETLPL FPMHSEDILG NMKTTSEGGG G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-27WOX family protein