PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000082.1_g000054.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 208aa    MW: 24086.9 Da    PI: 6.263
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000082.1_g000054.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.14.1e-1596156357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t++ql++L+ l++    + p+ e+++e+  +l    ++++++V++WFqN +a+e++
  Rmu_sc0000082.1_g000054.1  96 NRWTPTPDQLRILQVLYYDkvLKCPTPEQIQEICLNLqqygQIEDENVFFWFQNLKARERQ 156
                                7****************96679*************************************97 PP
2Wus_type_Homeobox90.41.7e-2994157264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp+Q++iL+ ly+ + l+ P+ e+iq+i  +L++yG+ied+NVf+WFQN kaRerq 
  Rmu_sc0000082.1_g000054.1  94 TNNRWTPTPDQLRILQVLYYdKVLKCPTPEQIQEICLNLQQYGQIEDENVFFWFQNLKARERQN 157
                                679***************9868899*************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MQRLMFKVFQ PRLIPPFTLL EERYAGEWQP SCWFHPPEEG PHGPRDSFGS PTCPPRANSF  60
SVFSGDFNPT RGFNLRDRPS NGGDLLTRSI NRPTNNRWTP TPDQLRILQV LYYDKVLKCP  120
TPEQIQEICL NLQQYGQIED ENVFFWFQNL KARERQNLNE FRNVPVGGSL DLNFGSTSST  180
DDGRSIDLNF VRSDFHFSSF SQNFGPIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-22WOX family protein