PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000082.1_g000087.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 66aa    MW: 7384.27 Da    PI: 9.2378
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000082.1_g000087.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP501.2e-151558150
                        TCP  1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50
                               a+g+kdrhsk++T +g+      l+a++a++f+d+qd+LG+d++sk+++W
  Rmu_sc0000082.1_g000087.1 15 ATGGKDRHSKVCTTKGL------LVAHTAIQFYDMQDRLGYDRPSKAVDW 58
                               5899************9......9************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    
MGESHNNFHH RTTTATGGKD RHSKVCTTKG LLVAHTAIQF YDMQDRLGYD RPSKAVDWRG  60
EIGAVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.18e-20TCP family protein