PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000110.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 236aa    MW: 26753.4 Da    PI: 7.3133
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000110.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.29.7e-161452341399
                                TT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                         B3  13 sgrlvlpkkfaeehggkkeesktltledesg.rsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                                ++r+ +  +fa eh  k+ +  +l+l+++ g r W+v++i     +++ ++++ ++GWk+F ++n+L+egD++v++l++  e++
  Rmu_sc0000110.1_g000003.1 145 TNRVFINPEFALEHFCKEGSCCDLSLQNTLGdRIWTVQCISytisDGRMRTVISGAGWKSFRQDNHLEEGDVLVLELIE--ERR 226
                                46799*********77788889******6666*******6667755555558889*********************996..555 PP

                                .EEEEE-S CS
                         B3  92 lvvkvfrk 99 
                                ++v+++r+
  Rmu_sc0000110.1_g000003.1 227 CRVSIIRA 234
                                78999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGERNRNGKR PAVCEESQGF CLRIQSREDL KDGKKELPPA AVRKYGDQMA DHIFLKKRDG  60
KSLLAFIYWT KATWQPSALK MNMPISKYEA EAEAEAEAEA EAEARAISIS PRSSADEHQY  120
DISKVSSFRS DKPCLNVQIT ATSLTNRVFI NPEFALEHFC KEGSCCDLSL QNTLGDRIWT  180
VQCISYTISD GRMRTVISGA GWKSFRQDNH LEEGDVLVLE LIEERRCRVS IIRAQK