PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000159.1_g000025.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 189aa MW: 21517.4 Da PI: 11.0039

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000159.1_g000025.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.5	1.3e-19	88	149	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 rr+R+t+t+eq+ Leel+++ ++p+a+++++ +++l +++ +++++WFqNrRa+e++ Rmu_sc0000159.1_g000025.1 88 RRSRWTPTPEQIVHLEELYRSgIKTPTAQQIRQVTARLqnygRVEGKNIFYWFQNRRARERQ 149 89****************99************************************97 PP
2	Wus_type_Homeobox	107	1.1e-34	88	150	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 r+RWtPtpeQi Leely+sG++tP++++i+++ta+L++yG++e+kN+fyWFQNr+aRerqk Rmu_sc0000159.1_g000025.1 88 RRSRWTPTPEQIVHLEELYRSGIKTPTAQQIRQVTARLQNYGRVEGKNIFYWFQNRRARERQK 150 589***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MWTTMGSSSG CRDPNIRALP EYSIKAAYPQ PAVLLTPKLS STSNMTQIPL LPFHHHHQMV 60 PVTSNEKGRN SSDCSYSHKQ PAAAAAPRRS RWTPTPEQIV HLEELYRSGI KTPTAQQIRQ 120 VTARLQNYGR VEGKNIFYWF QNRRARERQK TRRALMSMHQ SDSKQQQQQT LTNNTISCLR 180 DKKSAGGTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01500.1	2e-24	WOX family protein