PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000165.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 318aa    MW: 36639.6 Da    PI: 4.0638
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000165.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.6e-105435898
                               EEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                         B3 58 ryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                               +y+++kGW+eFv++ gL++++++vF+++g+s+f   v ++ 
  Rmu_sc0000165.1_g000005.1  5 KYYFQKGWNEFVSETGLRVKEILVFHYTGNSDF--SVDIYG 43
                               69*****************************99..777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVDHKYYFQK GWNEFVSETG LRVKEILVFH YTGNSDFSVD IYGKNTIKKV YVKESHAFPG  60
SKDVGMPTDI DYPMEEADED DDPSVEILDD VAPYPTSRGE KYQILSPLPH IDYDFDIQDD  120
IYDENEHESY KNEEDENEED VDNEDEDEHE SEEEDVNESL SEEENETAEH VDFGDEDQNE  180
SEEENESEDE DHNDDDDDDN DDSVETLSEK PPCWKTRGKP PLELQLRKSK RTCSNTKAQS  240
NIKDAGGSSR TESFRKPEIP KKMNLAMEVG KHNALQRALD FKSKSVNPCL VLPMRASYAR  300
GSYLVRLLPI TTFAKFFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-08B3 family protein