PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000168.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 99aa    MW: 11319 Da    PI: 11.7777
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000168.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.51.7e-191663148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               rg+WT++Ed++l   v+q+G g+W++ +++ g+ R++k+c++rw++yl
  Rmu_sc0000168.1_g000003.1 16 RGPWTPQEDKKLFAFVQQHGHGSWRSLPQKAGLQRCGKSCRLRWRNYL 63
                               89*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MGRQSNSTVA SPGIRRGPWT PQEDKKLFAF VQQHGHGSWR SLPQKAGLQR CGKSCRLRWR  60
NYLNPDIKRG NFSLQEDQTI ILLHALLGNR QLIAKLNLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.22e-44MYB family protein