PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000173.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 255aa MW: 28920.7 Da PI: 9.835

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000173.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.7	5.1e-14	93	170	17	100
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100 +p +f++++g++ s t++ + g +Wev l +++ g+++++kGW +F k L +D +vF ++g+s+f v++f+ks Rmu_sc0000173.1_g000009.1 93 GIPEDFVSKYGKD--LSNSATFRLPCGSEWEVGL--TRYNGEVWFKKGWPDFLKFYSLGYNDLLVFGYEGKSRF--QVSIFDKS 170 69******977..8889***********..*****************************98999..***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MGYVPIQFHA QIRVSQVGIE QFQAEIVDHE VNRKLGFPGV VGKLKTLGQR KQRDSQSQRN 60 GTENGAGIEQ LQIAKQMGKL GFREKQRLGT IWGIPEDFVS KYGKDLSNSA TFRLPCGSEW 120 EVGLTRYNGE VWFKKGWPDF LKFYSLGYND LLVFGYEGKS RFQVSIFDKS TIEIEYPVTV 180 PNIEESDEHD DSSVEILDDF PLYLRKARET SRLPGPQPRM KNRTGSSGTA KINLSFEKST 240 KKKETHGSKS GRKST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-17	B3 family protein