PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000210.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 228aa    MW: 25529.2 Da    PI: 4.4865
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000210.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.71.5e-1647107357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t++ql++L+el++    ++p+ e+++e+   l    ++++++V++WFqN +a+e++
  Rmu_sc0000210.1_g000006.1  47 NRWTPTPDQLRILQELYYDkvLKNPTPEQIQEICLYLqqygHIEDKNVFFWFQNLKARERQ 107
                                7****************96679*************************************97 PP
2Wus_type_Homeobox95.93.4e-3145108264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp+Q++iL+ely+ + l++P+ e+iq+i   L++yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0000210.1_g000006.1  45 TNNRWTPTPDQLRILQELYYdKVLKNPTPEQIQEICLYLQQYGHIEDKNVFFWFQNLKARERQK 108
                                679***************987899***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS IQAAGSSANT PIRPTNNRWT PTPDQLRILQ  60
ELYYDKVLKN PTPEQIQEIC LYLQQYGHIE DKNVFFWFQN LKARERQKLR EFRNVRVGGS  120
LDLNFGSTSS ADDGRSIDLN FGSTGSTSTD RSIDLNFGSR VGYGVDGSIM EQRGEYHQEI  180
ETLPLFPMHG EDIFGNMKTT SEGGSGYGGG SRISLELSLN SYGDADMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-24WOX family protein