PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000215.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Trihelix
Protein Properties Length: 86aa    MW: 9852.46 Da    PI: 10.3231
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000215.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.49e-0933744586
                   trihelix 45 rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                               +++ qC++k+++ +kry+++k+++++   +sss +++f+ ++
  Rmu_sc0000215.1_g000019.1 33 KTALQCRQKMKKHRKRYRAEKQRASRYPGQSSSLWALFHLMD 74
                               6899**********************99999********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MSVSHLSLCM LSFIFKDHVA AAMTSTAPPS PLKTALQCRQ KMKKHRKRYR AEKQRASRYP  60
GQSSSLWALF HLMDEMESDP DRGLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-10Trihelix family protein