PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000235.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GRAS
Protein Properties Length: 207aa    MW: 23632.5 Da    PI: 10.3076
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000235.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS75.69.3e-24103204273373
                       GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveees 355
                                 ++pre++ r++ Ere+  ++i+nv+aceg er+er  t++kW+ r  + G+k+ pl+++  k++k l + ++  + +rv+e++
  Rmu_sc0000235.1_g000004.1 103 PTIPREDKRRMMFEREIYDNDIMNVIACEGLERFERPDTYKKWQIRNVRTGLKQHPLDQERLKKVKNLSKLMGyHKDFRVKEDR 186
                                689*******************************************************************9999999******* PP

                       GRAS 356 gslvlgWkdrpLvsvSaW 373
                                +++++gWk+r +v++S+W
  Rmu_sc0000235.1_g000004.1 187 HWMLQGWKGRIIVALSFW 204
                                ****************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MLTDALSPKS YERSYSVVLD LEDACGGGIW HRGGRRLLVL LGKKAAGAAG SCGCPRGTAG  60
AADCYVSYRG SGCTVGEAEV RLVRARCKQS SRWRVLVVVV RAPTIPREDK RRMMFEREIY  120
DNDIMNVIAC EGLERFERPD TYKKWQIRNV RTGLKQHPLD QERLKKVKNL SKLMGYHKDF  180
RVKEDRHWML QGWKGRIIVA LSFWISA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07520.15e-33GRAS family protein