PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000240.1_g000065.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 170aa    MW: 19203.9 Da    PI: 10.5926
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000240.1_g000065.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.57.4e-16767256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t++q+++L+el+     + p+ ++ ++++ +l    +++ ++V++WFqN+Ra ek
  Rmu_sc0000240.1_g000065.1  7 NTRWLPTRDQIRILKELYDDkgVKSPTVKQVQRITLQLkwygQIENKNVFYWFQNQRAWEK 67
                               58*****************6579**********************************9877 PP
2Wus_type_Homeobox90.12.2e-29669264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               ++tRW Pt +Qi+iL+ely+ +G+++P+ +++qrit +L+ yG+ie+kNVfyWFQN++a e+ k
  Rmu_sc0000240.1_g000065.1  6 SNTRWLPTRDQIRILKELYDdKGVKSPTVKQVQRITLQLKWYGQIENKNVFYWFQNQRAWEKLK 69
                               789****************999*************************************99977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MHYKQSNTRW LPTRDQIRIL KELYDDKGVK SPTVKQVQRI TLQLKWYGQI ENKNVFYWFQ  60
NQRAWEKLKN NKLTSNVQVP KQRSGLVGGS INLNFGSTIS AGVGGSIMEQ RGENHQEIKT  120
LPLFPMHSED IFGNMKTTSD GGGGHGGGSY ISLELSLSCK GKARKSFRSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-23WOX family protein