PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000258.1_g000022.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 155aa MW: 17279.3 Da PI: 5.6772

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000258.1_g000022.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.3	2.7e-08	30	67	2	37
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl 37 ++R+t+t++q+++L+el+++ r p+ae+++++ +l Rmu_sc0000258.1_g000022.1 30 STRWTPTTDQIRILKELYYNkgVRSPTAEQIQRICLHL 67 58**************97689********98776 PP
2	Wus_type_Homeobox	49.4	1.1e-16	29	68	2	40
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLe 40 ++tRWtPt++Qi+iL+ely+ +G+r+P++e+iqri +L+ Rmu_sc0000258.1_g000022.1 29 SSTRWTPTTDQIRILKELYYnKGVRSPTAEQIQRICLHLR 68 789*************9779***********99997 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MEPQTQQPKE DGGSNKAAGS SANKLCRQSS TRWTPTTDQI RILKELYYNK GVRSPTAEQI 60 QRICLHLRWQ MGNYGGYGSL NMEIETLPLF PMHGEDIFGN MKTTYDEGGG YSYYSGGWGG 120 INDGSHISLE LSLNSYCLTP FSCEGVFSAR EETKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	4e-18	WOX family protein