PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000260.1_g000013.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB_related

Protein Properties

Length: 557aa MW: 62510.1 Da PI: 7.3501

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000260.1_g000013.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.5	2.7e-12	114	154	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W+ +++++g +R + qc+++++ Rmu_sc0000260.1_g000013.1 114 WNADEEMLLLEGIEMYGFGNWTEVSEHVG-TRRRQQCIDHYN 154 ***************************.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MGRSRAVAQS AVGDSNHSRG KRKRTASGAE LAENSSTAQK GLAQELSEPK GAFYHCNYCQ 60 KDISGKIRIK CGVCPDFDLC IECFSVGVEV TPHKCNHPYR VMDNLSFPLI CPDWNADEEM 120 LLLEGIEMYG FGNWTEVSEH VGTRRRQQCI DHYNAIYLNS PCFPLPDMSH VMGKSREDLL 180 ALAKGSGQIK KELPMFMEIT LKEVSPFSAG AKCEEPKKTA ASKSSSHSTA DGASGAGKKA 240 SNKLQIKDEP KVTKVEESQR SIGEKKLRSL VEEGPSVTEL SGYNYKRQEF EIEYDNDAEQ 300 ILADMEFLDT DTDRDRELKL RVLHVYGKRL DERKRRKDFV LERNLLHPDP LEKNLSPEVG 360 EIYQRFKVFM QFHSNEDHKE LLKSIIEEQQ IVKRILDLQE ARAAGCRTAT EATKYLEQKR 420 KNESEESLQK IKENSQAGAS GKVLQQISPR GAVRGSALLH PGIKDLPLTT QPIPNPLDDW 480 DISGLAGANL LSETDKRLCC ELRIIPSHYL HMLQTISTEI SSGNVKKKSD AHSLFKAEPS 540 KVDRVFDMVI RKGLTLA

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MGRSRAVAQS AVGDSNHSRG KRKRTASGAE LAENSSTAQK GLAQELSEPK GAFYHCNYCQ  60
KDISGKIRIK CGVCPDFDLC IECFSVGVEV TPHKCNHPYR VMDNLSFPLI CPDWNADEEM  120
LLLEGIEMYG FGNWTEVSEH VGTRRRQQCI DHYNAIYLNS PCFPLPDMSH VMGKSREDLL  180
ALAKGSGQIK KELPMFMEIT LKEVSPFSAG AKCEEPKKTA ASKSSSHSTA DGASGAGKKA  240
SNKLQIKDEP KVTKVEESQR SIGEKKLRSL VEEGPSVTEL SGYNYKRQEF EIEYDNDAEQ  300
ILADMEFLDT DTDRDRELKL RVLHVYGKRL DERKRRKDFV LERNLLHPDP LEKNLSPEVG  360
EIYQRFKVFM QFHSNEDHKE LLKSIIEEQQ IVKRILDLQE ARAAGCRTAT EATKYLEQKR  420
KNESEESLQK IKENSQAGAS GKVLQQISPR GAVRGSALLH PGIKDLPLTT QPIPNPLDDW  480
DISGLAGANL LSETDKRLCC ELRIIPSHYL HMLQTISTEI SSGNVKKKSD AHSLFKAEPS  540
KVDRVFDMVI RKGLTLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	333	338	RKRRKD