PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000284.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 259aa    MW: 28397.2 Da    PI: 4.5554
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000284.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox505.1e-1647107357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t+ ql++L el++    ++p+ e+++++  +l    ++++++V++WFqN +a+e++
  Rmu_sc0000284.1_g000007.1  47 NRWTPTPAQLRILHELYYDkvLKNPTPEQIQKICLHLqqygQIEDKNVFFWFQNLKARERQ 107
                                7****************96679*************************************97 PP
2Wus_type_Homeobox97.31.2e-3145108264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp Q++iL+ely+ + l++P+ e+iq+i  +L++yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0000284.1_g000007.1  45 TNNRWTPTPAQLRILHELYYdKVLKNPTPEQIQKICLHLQQYGQIEDKNVFFWFQNLKARERQK 108
                                579***************987899***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQQVEDGGN NQAAGSSANT PIRPTNNRWT PTPAQLRILH  60
ELYYDKVLKN PTPEQIQKIC LHLQQYGQIE DKNVFFWFQN LKARERQKLK EIRNVRVGGS  120
LDLKFGSTSS TDGGRSIDLN FDSTGSTGDD GSIDLTFGSC VGYCVDPYSS SPFNTNTRAT  180
SFGTTGGQSP MEQQGGDHQE VETLPLFPEH GEDILGNPKT TSEEGSTFGY YSGGSGGYNS  240
GSPVSLELSL NPFRAADLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-24WOX family protein