PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000284.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 190aa    MW: 21186.8 Da    PI: 10.0794
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000284.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.14.6e-162889257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               r+R+++t++q+++L+elF++   r p+ e+++++  +l    +++ ++V++WF N+Ra+ek+
  Rmu_sc0000284.1_g000010.1 28 RNRWNPTTDQIRILKELFYNkgVRSPTIEQIQRICLQLkwygKIEFKNVYFWFVNQRAQEKR 89
                               89*****************7789**************************************7 PP
2Wus_type_Homeobox84.71e-272891365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               r+RW+Pt++Qi+iL+el++ +G+r+P+ e+iqri  +L+ yGkie kNV++WF N++a e++k+
  Rmu_sc0000284.1_g000010.1 28 RNRWNPTTDQIRILKELFYnKGVRSPTIEQIQRICLQLKWYGKIEFKNVYFWFVNQRAQEKRKK 91
                               79**************98769*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MEPQTQEPTE DGGSNKATGS SANMLRGRNR WNPTTDQIRI LKELFYNKGV RSPTIEQIQR  60
ICLQLKWYGK IEFKNVYFWF VNQRAQEKRK KRSTSDVHVP MQRSRLVGDS INLNSGSTSS  120
AGVGGSIMEQ RGEDHQEIKT LPLFPMHGED IFGNMKTTSD GGGGHGGGSY ISLELSLSCE  180
GKAGKSFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-24WOX family protein