PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000286.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

C2H2

Protein Properties

Length: 175aa MW: 19261.3 Da PI: 10.2489

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000286.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.2	6.3e-05	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H Rmu_sc0000286.1_g000005.1 90 HECSICGLEFSSGQALGGHMRRH 112 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MKRTREELVG GDMANILMLL SCRLETNFKK CSSSPNHVFE CKTCKRQFPS FQALGGHRAS 60 HKRPGTLMGS DQDPKIETES GKGKTKRKKH ECSICGLEFS SGQALGGHMR RHRMTNAGCS 120 SPVPAAAAVA GASKIPGLMR SNSKRVMFLN MDLNLTPLEN DLKLLFGNWE YGTKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	9e-34	C2H2 family protein