PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000288.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 214aa    MW: 23990.2 Da    PI: 4.6637
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000288.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox49.29e-163999357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +R+t+t++ql++L+el++    +yp+ e+++e+  +l    ++++++ ++WFqN +a+e++
  Rmu_sc0000288.1_g000006.1 39 NRWTPTPDQLRILQELYYDkvLKYPTPEQIQEIFLHLqqygQIEDKNLFFWFQNLKARERQ 99
                               7****************96679*************************************97 PP
2Wus_type_Homeobox91.58.1e-3037100264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp+Q++iL+ely+ + l+ P+ e+iq+i  +L++yG+iedkN f+WFQN kaRerqk
  Rmu_sc0000288.1_g000006.1  37 TNNRWTPTPDQLRILQELYYdKVLKYPTPEQIQEIFLHLQQYGQIEDKNLFFWFQNLKARERQK 100
                                689***************99688999*************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MEPRTLQLME LQTQQQIEDE GNNQAAGSSA NTPIRQTNNR WTPTPDQLRI LQELYYDKVL  60
KYPTPEQIQE IFLHLQQYGQ IEDKNLFFWF QNLKARERQK LREFRNVRVG GSLDLNFGST  120
SSTDDGRSID LNFGSTGSTG TDGSIDLNFG SRVHYGVDPH SSSPFNTNTS TTSYGTAGGQ  180
TSMDQRGGDH QEVETLPLFP VHGEDVLGDP KTTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-25WOX family protein