PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000288.1_g000014.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 194aa MW: 21703.7 Da PI: 9.2204

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000288.1_g000014.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	83	7.3e-26	23	113	2	86
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssaseceaes 77 + +kd hsk++T++g+Rd R+Rl ++a++f+d+qd+L + ++sk ++W +++ak+ai+el+ + +s+ + + s Rmu_sc0000288.1_g000014.1 23 TDQKDCHSKVYTAKGPRDHRIRLTTHTAIQFYDVQDQLEYYRPSKVVDWVIKKAKTAIDELPPWnpksisvqT-TSS-PTVPIS 104 568************************************************************9665555421.221.112222 PP TCP 78 ssssasnss 86 + ++n + Rmu_sc0000288.1_g000014.1 105 VAQDTQNMN 113 222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MEYAGRKMGE SHNNLHHRAM TATDQKDCHS KVYTAKGPRD HRIRLTTHTA IQFYDVQDQL 60 EYYRPSKVVD WVIKKAKTAI DELPPWNPKS ISVQTTSSPT VPISVAQDTQ NMNLHFSMVE 120 APSSLSANRQ GAMVGCSGVA ELVNQNRSNF LQVRMVWRWC CMSGTMERMA GGLEERMRVV 180 VAKSSAAAAG MNSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-30	TCP family protein