PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000309.1_g000036.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 189aa MW: 21721.6 Da PI: 8.1299

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000309.1_g000036.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.7	2.9e-21	58	148	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 fY +YAk +GF+vrk+ +++s r+g++t r++vCs eg+r e+ + +++ r +++ tr++C + +kv+ k ++ ++v ++++ Rmu_sc0000309.1_g000036.1 58 FYYAYAKAMGFDVRKDDKRTSARTGRVTIRKWVCSAEGERLEKYMDnNNNVRMPKKLTRCHCPCLFKVRYFKeKNSYVVVDFKT 141 9*************************************99988745666779***********999899***** PP FAR1 84 eHnHela 90 +H+H+la Rmu_sc0000309.1_g000036.1 142 DHSHDLA 148 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MSSQDALDEP QPEISDTNLL ESESGINQLE YNGIRYDKLA LEDIIGMKFV TVEAAETFYY 60 AYAKAMGFDV RKDDKRTSAR TGRVTIRKWV CSAEGERLEK YMDNNNNVRM PKKLTRCHCP 120 CLFKVRYFKE KNSYVVVDFK TDHSHDLAQP QESHFLRSHR SVPDSHLALA TSMRRVSIKT 180 CTSCISIHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-17	FAR1 family protein