PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000324.1_g000023.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 224aa MW: 24876.9 Da PI: 7.8594

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000324.1_g000023.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	82.6	1e-25	101	186	2	78
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec.eae 76 + +kdrhsk++T++g++d l a++a +f+d+qd+LG+d++s +++WL+++ak+ i+el + ++ss++ + +a+ Rmu_sc0000324.1_g000023.1 101 TYRKDRHSKVCTAKGPKDHPAWLAAHTANQFYDVQDRLGYDRPSMAVDWLIKKAKAVIDELSSWnpnsisvqTTSSSNVSiSAA 184 679**********************************************************99954444442222221112222 PP TCP 77 ss 78 ++ Rmu_sc0000324.1_g000023.1 185 QE 186 22 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MGSPRSDQPK PPHRGHLVHL GMLVRFLGSS STNSRSWWRI KEEINPVART GRPDRNSYFW 60 ADMLKVSVQF NPENVIVSIR IASSSTASEI VEARDHILRA TYRKDRHSKV CTAKGPKDHP 120 AWLAAHTANQ FYDVQDRLGY DRPSMAVDWL IKKAKAVIDE LSSWNPNSIS VQTTSSSNVS 180 ISAAQETQNV SLHFSMVEAP SEDGVEVVLH VGNYGEDGGV GLEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-33	TCP family protein