PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000352.1_g000015.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 699aa MW: 75419.5 Da PI: 6.3454

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000352.1_g000015.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.1	8.9e-14	229	290	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + +L ++++ + e a+lk+++ Rmu_sc0000352.1_g000015.1 229 EDEKRKARLMRNRESAQLSRQRKKHYVEELEDKVRAMHTTIADLNNKISYIMAENATLKQQL 290 6789*******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MEDSVVAEPP ILPPDLTRNA TNSGEDFESL PIPPLDPQFF PSDTGMPSDS FMSDIGFGFG 60 SEDNCDYELT FDDLDNLYLP SEADDFLIPD GFDPTAQPSG DSTLLLDSDS PESGISKGSS 120 DGVVSGFLNY PSSESGGHDQ EFSENSGGPL SSQGSGIPEA GNSPTHSGNS DRDVSSSNVT 180 TADEKVKIEE EMTRSGFVAK RKKESGGEEG NVESRSSKYR RSESGMNDED EKRKARLMRN 240 RESAQLSRQR KKHYVEELED KVRAMHTTIA DLNNKISYIM AENATLKQQL SCGSGMCPPP 300 QPPPPGMYPM PPMGYPWMPY SPYVVKPQGS QVPLVPIPRL KPQQPVAAPK PKKKSESKTK 360 KVASISFLGL LFFLLLFGGL VPMVNVGFGG SDYVRDRFYD QQRAKVLTVE GHLNGSEGNI 420 PLGISGGKFD VTNKIHERGH KQKEQGLPGV GNASEPLVAS LYVPRNDKLV KIDGNLIIHS 480 VLASEKAKTH KKSREARVEG AKDLVSALAI PEAGVNRGRR APLYRTPAGQ RKALTAGSAD 540 GKLQQWFREG LAGPLLSSGM CTEVFQFDVS AATHSGGIIP ASSVANVSEH SSNSARLNRG 600 GNRRILGGRA IPLAGSNHNV TNEERAIRNN QSSNNFQGSN SSMVVSVLVD PREAGDIDVD 660 GMIKPKSLSR VFVVLLLDSV KYVTYSCVLP RSAPHLVTT

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MEDSVVAEPP ILPPDLTRNA TNSGEDFESL PIPPLDPQFF PSDTGMPSDS FMSDIGFGFG  60
SEDNCDYELT FDDLDNLYLP SEADDFLIPD GFDPTAQPSG DSTLLLDSDS PESGISKGSS  120
DGVVSGFLNY PSSESGGHDQ EFSENSGGPL SSQGSGIPEA GNSPTHSGNS DRDVSSSNVT  180
TADEKVKIEE EMTRSGFVAK RKKESGGEEG NVESRSSKYR RSESGMNDED EKRKARLMRN  240
RESAQLSRQR KKHYVEELED KVRAMHTTIA DLNNKISYIM AENATLKQQL SCGSGMCPPP  300
QPPPPGMYPM PPMGYPWMPY SPYVVKPQGS QVPLVPIPRL KPQQPVAAPK PKKKSESKTK  360
KVASISFLGL LFFLLLFGGL VPMVNVGFGG SDYVRDRFYD QQRAKVLTVE GHLNGSEGNI  420
PLGISGGKFD VTNKIHERGH KQKEQGLPGV GNASEPLVAS LYVPRNDKLV KIDGNLIIHS  480
VLASEKAKTH KKSREARVEG AKDLVSALAI PEAGVNRGRR APLYRTPAGQ RKALTAGSAD  540
GKLQQWFREG LAGPLLSSGM CTEVFQFDVS AATHSGGIIP ASSVANVSEH SSNSARLNRG  600
GNRRILGGRA IPLAGSNHNV TNEERAIRNN QSSNNFQGSN SSMVVSVLVD PREAGDIDVD  660
GMIKPKSLSR VFVVLLLDSV KYVTYSCVLP RSAPHLVTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-141	bZIP family protein